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Compilers and Libraries
| Name | Description |
| Compilers | Intel and GNU compilers for C/C++ and Fortran programs |
Life Science/Molecular Modeling and Visualisation
| Name | Description | |
| Amber | Manual | A molecular mechanical force fields and simulation program |
| Autodock | Manual | A suite of automatic docking tools |
| Blast | Sequencer for nucleotide or protein |
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| DiscoveryStudio | Manual | Molecular Simulation and Drug Design |
| Gamess | ab initio molecular electronics structure calculation |
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| Gaussian | ab initio quantum mechanics |
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| GaussView | Molecular Structure Visualisation & Graphical interface for Gaussian |
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| Gromacs | Molecular dynamics package |
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| Hmmer | Protein sequence analysis |
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| LAMMPS | Molecular Dynamics Simulator |
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| MaterialsStudio | Manual | Materials modeling and simulation product suite |
| Modeller | Comparision of protein 3-D structures |
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| Molden | A pre- and post processing program of molecular and electronic structure |
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| MrBayes | A software performs Bayesian inference of phylogeny |
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| NAMD | Parallel molecular dynamics code for biomolecular systems |
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| PHASE | Molecular phylogenetic inference package |
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| Quantum Espresso | Molecule Structure Calculation and Nanoscale Material Modeling | |
| Siesta | ab initio molecular dynamics simulations method and tool |
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| VMD | Molecular visualization program |
Computational Fluid Dynamics
| Name | Description | ||
| CFX | Manual | FAQ | General purpose CFD package |
| Gambit | Manual | FAQ | General-purpose preprocessor for CFD analysis, default for Fluent |
| Fluent | Manual | FAQ | General purpose CFD package |
| Workbench | Manual | FAQ | General-purpose preprocessor for CFD analysis, default for CFX |
| OpenFOAM | Manual | Open source CFD software package |
Engineering Modeling & Design
| Name | Description | ||
| Abaqus | Manual | FAQ | A finite-element program designed for advanced linear and non-linear engineering analysis applications. |
| Meep | Manual | FAQ | A free, finite-difference time-domain (FDTD) software for computational electromagnetism. |
Numerical & Symbolic Tools
| Name | Description | ||
| Maple | Manual | FAQ | Interactive tool for symbolic algebra |
| Mathematica | FAQ | Interactive tool for technical computing |
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| Matlab | FAQ | Interactive tool for technical computing |
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| OOMMF | Manual | Object Oriented MicroMagnetic Framework tool |
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| Nmag | Manual | Micromagnetic Simulation Package |
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| R | Manual | A free software environment for statistical computing and graphics |
Visualisation & Imaging
| Name | Description | ||
| Analyze | Medical image visualisation |
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| Ensight | Manual | FAQ | Engineering visualisation |
| Tecplot | Manual | Engineering visualisation |
